BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C11SP1|AL425511
(348 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 639 0.0
>3x_Contig1619
Length = 7770
Score = 639 bits (315), Expect = 0.0
Identities = 332/346 (95%)
Strand = Plus / Plus
Query: 1 ccataaaatgggtaattcgcgggaggtataaatatttataattataatatatatkatkag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 7194 ccataaaatgggtaattcgcgggaggtataaatatttataattataatatatattattag 7253
Query: 61 tkatatarkakcbccgsggctcacccaaccananggttgggtgatgccgcggggaggata 120
| ||||| | | ||| |||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 7254 ttatataatagccccgcggctcacccaaccatacggttgggtgatgccgcggggaggata 7313
Query: 121 ttaccaattattcctccctatcgcacacacatggtgcgtagggaggggaacataacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7314 ttaccaattattcctccctatcgcacacacatggtgcgtagggaggggaacataacatgt 7373
Query: 181 aattggaacatataattactatataactatataattaccattaatattattattataata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7374 aattggaacatataattactatataactatataattaccattaatattattattataata 7433
Query: 241 ttaatadnssccgcggacttatcctctgataattccaggggataagtccgcgggaaaagt 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7434 ttaataaaccccgcggacttatcctctgataattccaggggataagtccgcgggaaaagt 7493
Query: 301 attcaattgtctatatggagaatcaaaattataaataatattaata 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7494 attcaattgtctatatggagaatcaaaattataaataatattaata 7539
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3075
Number of Sequences: 1807
Number of extensions: 3075
Number of successful extensions: 152
Number of sequences better than 1.0e-20: 1
length of query: 348
length of database: 10,358,551
effective HSP length: 15
effective length of query: 333
effective length of database: 10,331,446
effective search space: 3440371518
effective search space used: 3440371518
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)